BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D09LP1|AL425119
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1266 1901 0.0
>3x_Contig1266
Length = 8887
Score = 1901 bits (957), Expect = 0.0
Identities = 971/976 (99%), Gaps = 1/976 (0%)
Strand = Plus / Plus
Query: 1 gatcaaaagtgagtagtcatgaacttctgcctctgtttggtcactggagagatgttttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 gatcaaaagtgagtagtcatgaacttctgcctctgtttggtcactggagagatgttttct 3721
Query: 61 aggtctaacataaacgatagggtgacccaatctgtcgaacccgtgaattactgcctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3722 aggtctaacataaacgatagggtgacccaatctgtcgaacccgtgaattactgcctttct 3781
Query: 121 caactckwtatttttgacgtaaccggctttatcatcttcgtaggcaccaagttcacctct 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3782 caactcgatatttttgacgtaaccggctttatcatcttcgtaggcaccaagttcacctct 3841
Query: 181 cttaataatgtcatctggacgagcgtccttcaacctccaacgtaaagaattcgcaagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 cttaataatgtcatctggacgagcgtccttcaacctccaacgtaaagaattcgcaagcat 3901
Query: 241 atacatagttttatctgtgttccattttctcgctctcaaaaatctcaacaccaaattatc 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 atacatagttttatctgtgtcccattttctcgctctcaaaaatctcaacaccaaattatc 3961
Query: 301 tggataatctacccttaacatgtcccacaaattgtttctaatttcttctggctgaagttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3962 tggataatctacccttaacatgtcccacaaattgtttctaatttcttctggctgaagttc 4021
Query: 361 cttcaaagcgtcatgaaccatattaggagtgtatgcagcttcaatagattcgcgagatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4022 cttcaaagcgtcatgaaccatattaggagtgtatgcagcttcaatagattcgcgagatct 4081
Query: 421 cgtcgaagtcacagaagaggtacgtgaatnacggctgcggggcttaatgggttctttctt 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4082 cgtcgaagtcacagaagaggtacgtgaatgacggctgcggggcttaatgggttctttctt 4141
Query: 481 ctctgtcttcgtggatttacggaatctaccgaaaagtttacctgttttcttagcgccgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4142 ctctgtcttcgtggatttacggaatctaccgaaaagtttacctgttttcttagcgccgct 4201
Query: 541 ttcaactgtcgcatggctagcttctgacgaaacagtattattcctacgtaatgaatcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4202 ttcaactgtcgcatggctagcttctgacgaaacagtattattcctacgtaatgaatcatg 4261
Query: 601 ataatgtgttagaaccttccttgaatcaactggaatatcccaaaagttgaataagtgcgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4262 ataatgtgttagaaccttccttgaatcaactggaatatcccaaaagttgaataagtgcgc 4321
Query: 661 ccatacctgctttagtttagtttcttgctcttcgtttaacgtctcaatacgacccggttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4322 ccatacctgctttagtttagtttcttgctcttcgtttaacgtctcaatacgacccggttg 4381
Query: 721 ttcttgagaactcattgttaattccaattgaaaactagctgatgtactagttacaaatcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382 ttcttgagaactcattgttaattccaattgaaaactagctgatgtactagttacaaatcc 4441
Query: 781 aaacacagacgacgataagttgagtcttaattgatcaagcaaatgaataattctacactt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4442 aaacacagacgacgataagttgagtcttaattgatcaagcaaatgaataattctacactt 4501
Query: 841 aaacggccagcctaagtttaatgtgtcttgatctattgacaattgtaaagtttaagtatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4502 aaacggccagcctaagtttaatgtgtcttgatctattgacaattgtaaagtttaagtatg 4561
Query: 901 aaatggtgtttcttttatattttcacactaacgaaaatcaaagaaacgcgccaattcgag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4562 aaatggtgtttcttttatattttcacactaacgaaaatcaaagaaacgcgccaattcgag 4621
Query: 961 ag-aaaaattggcaga 975
|| |||||||||||||
Sbjct: 4622 agaaaaaattggcaga 4637
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7060
Number of Sequences: 1807
Number of extensions: 7060
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)